BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008B11LP1|AL425818
(811 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1734 1497 0.0
>3x_Contig1734
Length = 17938
Score = 1497 bits (755), Expect = 0.0
Identities = 804/811 (99%), Gaps = 7/811 (0%)
Strand = Plus / Minus
Query: 1 acacaggaacccctcttttaaggcttaaaagcaacattcgagaccctttgctctcgagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11779 acacaggaacccctcttttaaggcttaaaagcaacattcgagaccctttgctctcgagat 11720
Query: 61 tacaacattttgcactgatattttgcaccgaaatatggctgaaagcattgaaatggaaaa 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 11719 tacaacattttgcactgat-ttttgcaccgaaatatggctgaaagcattgaaatggaaaa 11661
Query: 121 agttaattttggaaaatgattcgatgctttaaagtatgcaccttggtacaaataggaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11660 agttaattttggaaaatgattcgatgctttaaagtatgcaccttggtacaaataggaaat 11601
Query: 181 aactgtatattcatacaagtttaacacttttatacacgtttatatttgtttgataccatt 240
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 11600 aactgt-tattcatacaagtttaacacttttatacacgtttatatttgtttg-taccatt 11543
Query: 241 cagatttttcaagtctaacaccagacaatagagatatcgaaagaatttgtgttaaaagtc 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 11542 cagatttttcaagtctaacaccagacaatag-gatatcgaaagaatttgtgttaaaagtc 11484
Query: 301 atcagtagggcctttttcgttttctttcccttatttatttgctttctatatttattttgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11483 atcagtagggcctttttcgttttctttcccttatttatttgctttctatatttattttgc 11424
Query: 361 attttgtcatgtccgatgcttccacctggttcaatgaagtggatccccgtgaattatacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11423 attttgtcatgtccgatgcttccacctggttcaatgaagtggatccccgtgaattatacg 11364
Query: 421 ctgataaggtcattgggtgcgatgggtgcggtgattctccgttaaatgggaaaaaagatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11363 ctgataaggtcattgggtgcgatgggtgcggtgattctccgttaaatgggaaaaaagatg 11304
Query: 481 ggattgttatgtggtccgatattacgtctcataaacgttgattatgaaaagaatttgtac 540
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11303 ggattgtt-tgtggtccgatattacgtctcataaacgttgattatgaaaagaatttgtac 11245
Query: 541 cgtgggtcgatgcttatcgttacacaagaggtgaagttgctgagccaaaagttgaatttc 600
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 11244 cgtgggtcgatgcttatcgttac-caag-ggtgaagttgctgagccaaaagttgaatttc 11187
Query: 601 aagttggccagagtgaggagaagaatttagggtctgaatccaagcatcctaatttggaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11186 aagttggccagagtgaggagaagaatttagggtctgaatccaagcatcctaatttggaaa 11127
Query: 661 cgggccaatttgttgcgacgaaattttattcggagtctgattacagcttctatcgttatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11126 cgggccaatttgttgcgacgaaattttattcggagtctgattacagcttctatcgttatg 11067
Query: 721 cgattgagatcgagcttgattctgtggaacgtatgtgtaagtattccattgatggtaaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11066 cgattgagatcgagcttgattctgtggaacgtatgtgtaagtattccattgatggtaaat 11007
Query: 781 tggaacctcagtataggtttttcatcccaag 811
|||||||||||||||||||||||||||||||
Sbjct: 11006 tggaacctcagtataggtttttcatcccaag 10976
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6720
Number of Sequences: 1807
Number of extensions: 6720
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 811
length of database: 10,358,551
effective HSP length: 16
effective length of query: 795
effective length of database: 10,329,639
effective search space: 8212063005
effective search space used: 8212063005
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)